Functional connectivity estimation

Functions for analysing and estimating firing patterns and connectivity among neurons in order to better understand the underlying neural networks and information flow between neurons.

Network connectivity estimation

total_spiking_probability_edges(spike_trains)

Estimate the functional connectivity and delay times of a neural network

References

[{De Blasi}, 2019]

Stefano De Blasi, Manuel Ciba, Andreas Bahmer, and Christiane Thielemann. Total spiking probability edges: A cross-correlation based method for effective connectivity estimation of cortical spiking neurons. Journal of Neuroscience Methods, 312:169–181, January 2019. doi:10.1016/j.jneumeth.2018.11.013.